STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
KXB56384.1Putative methylmalonyl-CoA carboxyltransferase 1.3S subunit; KEGG: fnu:FN0200 1.7e-21 biotin carboxyl carrier protein of glutaconyl-COA decarboxylase. (123 aa)    
Predicted Functional Partners:
accA
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
 0.999
KXB56382.1
methylmalonyl-CoA carboxyltransferase 12S subunit family protein; KEGG: bpb:bpr_I1226 2.3e-138 mmdA; methylmalonyl-CoA decarboxylase subunit alpha; Psort location: Cytoplasmic, score: 9.26.
 
 0.999
KXB56385.1
glutaconyl-CoA decarboxylase subunit beta; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
 
  
 0.992
KXB56386.1
KEGG: csh:Closa_1328 1.1e-207 pyruvate carboxylase K01571; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.986
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
  
 0.974
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
  
 0.965
KXB56383.1
Sodium pump decarboxylase, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
   
  0.962
KXB57190.1
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.949
KXB56937.1
KEGG: bpb:bpr_I2485 2.0e-162 bcd; butyryl-CoA dehydrogenase Bcd K00248; Psort location: Cytoplasmic, score: 9.97.
  
 0.910
KXB57193.1
[acyl-carrier-protein] S-malonyltransferase; KEGG: cpy:Cphy_0516 1.9e-72 malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.860
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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