STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56387.1Potassium uptake protein, TrkH family; KEGG: ral:Rumal_3700 8.0e-120 H(+)-transporting two-sector ATPase K03498; Psort location: CytoplasmicMembrane, score: 10.00. (446 aa)    
Predicted Functional Partners:
KXB56388.1
TrkA protein; KEGG: suq:HMPREF0772_12145 1.1e-33 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.998
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
   
 
 0.831
KXB57801.1
Putative potassium transporter peripheral membrane component; KEGG: scp:HMPREF0833_11023 7.0e-89 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.774
KXB55495.1
Hypothetical protein; KEGG: smf:Smon_0593 0.00055 putative CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA.
  
 
 0.774
KXB56389.1
Acetyltransferase, GNAT family; KEGG: dru:Desru_1595 3.0e-49 N-acetyltransferase GCN5; K03823 phosphinothricin acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.714
KXB56386.1
KEGG: csh:Closa_1328 1.1e-207 pyruvate carboxylase K01571; Psort location: Cytoplasmic, score: 9.97.
       0.594
KXB56385.1
glutaconyl-CoA decarboxylase subunit beta; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
       0.586
KXB56383.1
Sodium pump decarboxylase, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
       0.553
KXB56384.1
Putative methylmalonyl-CoA carboxyltransferase 1.3S subunit; KEGG: fnu:FN0200 1.7e-21 biotin carboxyl carrier protein of glutaconyl-COA decarboxylase.
       0.553
KXB56382.1
methylmalonyl-CoA carboxyltransferase 12S subunit family protein; KEGG: bpb:bpr_I1226 2.3e-138 mmdA; methylmalonyl-CoA decarboxylase subunit alpha; Psort location: Cytoplasmic, score: 9.26.
       0.546
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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