STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56139.1ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0968 4.4e-261 lipid A export ATP-binding/permease msbA K06147; Psort location: CytoplasmicMembrane, score: 10.00. (584 aa)    
Predicted Functional Partners:
KXB56140.1
Transcriptional regulator, TetR family; KEGG: dat:HRM2_17590 0.00071 ABC-type molybdate/tungstate transporter ATP binding protein (ATPase); Psort location: Cytoplasmic, score: 8.96.
 
     0.920
KXB56138.1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0969 2.4e-253 lipid A export ATP-binding/permease msbA K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.826
KXB55743.1
Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 4.5e-05 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.758
KXB55744.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.751
KXB60150.1
Cobalt transport protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.688
KXB57287.1
Cobalt transport protein; KEGG: bya:BANAU_0146 5.6e-07 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
  0.679
KXB57286.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.654
KXB56137.1
Hypothetical protein.
       0.634
KXB60148.1
Transcriptional regulator, AraC family; KEGG: lsp:Bsph_1999 5.5e-05 adaA; methylphosphotriester-DNA alkyltransferase; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.515
KXB53089.1
ATPase, AAA family; KEGG: bmq:BMQ_4104 6.1e-42 spoVK; stage V sporulation protein K K06413; Psort location: CytoplasmicMembrane, score: 7.88.
    
 0.450
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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