STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56159.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (153 aa)    
Predicted Functional Partners:
KXB56158.1
Hypothetical protein.
       0.701
KXB56157.1
Hypothetical protein.
       0.507
KXB56160.1
Lactaldehyde reductase; KEGG: elm:ELI_1743 1.8e-163 hypothetical protein; K00048 lactaldehyde reductase; Psort location: Cytoplasmic, score: 9.97.
       0.497
KXB56161.1
Putative L-fucose mutarotase; KEGG: cpy:Cphy_3153 8.8e-50 transport protein RbsD/FucU; K02431 L-fucose mutarotase; Psort location: Cytoplasmic, score: 9.97.
       0.497
KXB56162.1
Hypothetical protein; KEGG: cfu:CFU_2104 5.6e-48 putative fucose ABC transporter substrate-binding component K10439; Psort location: Periplasmic, score: 9.76.
       0.497
KXB56163.1
Putative ribose transport system permease protein RbsC; KEGG: cpy:Cphy_2011 4.2e-98 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
       0.485
KXB56164.1
ABC transporter, ATP-binding protein; KEGG: cpy:Cphy_2010 5.5e-176 ABC transporter; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.485
KXB56165.1
Putative L-ribulose-5-phosphate 4-epimerase; KEGG: ssf:SSUA7_0857 2.6e-82 L-fuculose phosphate aldolase; K01628 L-fuculose-phosphate aldolase; Psort location: Cytoplasmic, score: 9.97.
       0.476
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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