STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB56162.1Hypothetical protein; KEGG: cfu:CFU_2104 5.6e-48 putative fucose ABC transporter substrate-binding component K10439; Psort location: Periplasmic, score: 9.76. (372 aa)    
Predicted Functional Partners:
KXB56163.1
Putative ribose transport system permease protein RbsC; KEGG: cpy:Cphy_2011 4.2e-98 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 0.992
KXB56164.1
ABC transporter, ATP-binding protein; KEGG: cpy:Cphy_2010 5.5e-176 ABC transporter; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
 0.984
KXB56161.1
Putative L-fucose mutarotase; KEGG: cpy:Cphy_3153 8.8e-50 transport protein RbsD/FucU; K02431 L-fucose mutarotase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.932
KXB57171.1
Putative ribose ABC transporter permease protein; KEGG: esi:Exig_2384 2.6e-75 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 0.917
KXB52980.1
Putative ribose ABC transporter permease protein; KEGG: gdj:Gdia_0690 3.6e-69 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 0.900
rbsA
Putative galactose/methyl galactoside ABC transporter, ATP-binding protein MglA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.886
rbsA-2
Putative ribose transport ATP-binding protein rbsa; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.867
KXB57170.1
Sugar-binding domain protein; KEGG: bst:GYO_3955 4.7e-28 D-ribose-binding protein K10439; Psort location: Periplasmic, score: 9.44.
  
  
  0.862
KXB57409.1
KEGG: csh:Closa_2373 4.8e-200 ABC transporter; K10542 methyl-galactoside transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.99.
 0.858
fucI
Arabinose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
 
     0.843
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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