STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB55744.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (196 aa)    
Predicted Functional Partners:
KXB55742.1
KEGG: sgg:SGGBAA2069_c11570 6.6e-93 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 9.99.
 
 
  0.951
KXB55743.1
Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 4.5e-05 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.947
KXB55746.1
ABC transporter, ATP-binding protein; KEGG: bsa:Bacsa_1721 3.5e-110 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.928
KXB55745.1
ABC transporter, ATP-binding protein; KEGG: bsa:Bacsa_1722 1.1e-124 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.927
KXB55747.1
KEGG: efu:HMPREF0351_12109 0.0014 TetR/AcrR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
 
     0.872
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.780
KXB56140.1
Transcriptional regulator, TetR family; KEGG: dat:HRM2_17590 0.00071 ABC-type molybdate/tungstate transporter ATP binding protein (ATPase); Psort location: Cytoplasmic, score: 8.96.
  
     0.767
KXB56139.1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0968 4.4e-261 lipid A export ATP-binding/permease msbA K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.751
KXB60151.1
KEGG: sgg:SGGBAA2069_c11570 6.6e-77 ABC transporter ATP-binding protein K02006; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.745
KXB56138.1
ABC transporter, ATP-binding protein; KEGG: ssr:SALIVB_0969 2.4e-253 lipid A export ATP-binding/permease msbA K06147; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.729
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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