STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB55557.1Hypothetical protein. (104 aa)    
Predicted Functional Partners:
KXB55555.1
Acetyltransferase, GNAT family; KEGG: sgg:SGGBAA2069_c12830 1.2e-31 acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.491
KXB55558.1
Hypothetical protein; KEGG: snc:HMPREF0837_11663 5.7e-39 phosphopentomutase; Psort location: Cytoplasmic, score: 8.96.
       0.482
KXB55553.1
Hypothetical protein; KEGG: ipo:Ilyop_0843 4.7e-28 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase.
       0.458
KXB55554.1
Hypothetical protein; KEGG: bqy:MUS_2618 1.0e-16 yqkA; putative acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.458
KXB55559.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.408
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.