STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB55610.1Hypothetical protein. (98 aa)    
Predicted Functional Partners:
KXB56983.1
KEGG: rho:RHOM_07925 1.2e-36 PTS system, beta-glucosides-specific IIA component / PTS system, beta-glucosides-specific IIB component / PTS system, beta-glucosides-specific IIC component; K02755 PTS system, beta-glucosides-specific IIA component; K02756 PTS system, beta-glucosides-specific IIB component K02757; Psort location: CytoplasmicMembrane, score: 9.82.
    
 0.876
KXB59985.1
KEGG: csh:Closa_1348 0. phosphoribosylformylglycinamidine synthase K01952; Psort location: Cytoplasmic, score: 9.94.
    
 0.812
KXB56984.1
KEGG: cbe:Cbei_4532 6.7e-203 PTS system, N-acetylglucosamine-specific IIBC subunit; K02803 PTS system, N-acetylglucosamine-specific IIB component K02804; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.726
KXB52985.1
KEGG: cls:CXIVA_15100 7.6e-163 NagE; phosphotransferase system IIA component; K02808 PTS system, sucrose-specific IIA component; K02809 PTS system, sucrose-specific IIB component K02810; Psort location: CytoplasmicMembrane, score: 10.00.
    
 0.726
KXB60839.1
Putative selenate reductase, YgfK subunit; KEGG: bpo:BP951000_0727 0. gltD; glutamate synthase GltD; K12527 putative selenate reductase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.711
KXB55609.1
Acetyltransferase, GNAT family; KEGG: shn:Shewana3_0771 5.0e-24 pantoate--beta-alanine ligase; Psort location: Cytoplasmic, score: 8.96.
       0.711
KXB52816.1
Hypothetical protein; KEGG: edi:EDI_156940 3.8e-10 trichohyalin; Psort location: Cytoplasmic, score: 8.96.
  
     0.602
KXB52813.1
Hypothetical protein.
 
      0.557
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
  
 
  0.446
KXB52815.1
Resolvase protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.442
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.