STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB55357.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
KXB55356.1
Hydrolase, P-loop family; KEGG: efc:EFAU004_00653 4.9e-17 ATPase K06925; Psort location: Cytoplasmic, score: 9.97.
       0.791
KXB55354.1
Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
       0.790
KXB55355.1
Universal bacterial protein YeaZ; KEGG: csh:Closa_0624 1.1e-67 peptidase M22 glycoprotease; K14742 hypothetical protease; Psort location: Cytoplasmic, score: 8.96.
       0.790
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.787
tsaD
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.782
KXB55358.1
Tex-like protein; KEGG: ase:ACPL_5336 1.8e-170 tex; transcriptional accessory protein K06959; Psort location: Cytoplasmic, score: 9.97.
       0.780
KXB55359.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.752
KXB55360.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.730
KXB55351.1
Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; KEGG: ere:EUBREC_0842 1.0e-25 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase.
       0.696
KXB55361.1
KEGG: csh:Closa_0617 1.1e-115 homoserine dehydrogenase; K00003 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
       0.620
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.