STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB54868.1Kinase domain protein; KEGG: ova:OBV_34190 1.7e-28 hypothetical protein; K08884 serine/threonine protein kinase, bacterial. (994 aa)    
Predicted Functional Partners:
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.947
KXB55036.1
Protein phosphatase 2C; KEGG: vfi:VF_0991 1.8e-19 protein phosphatase 2C K01090.
 
 0.918
KXB60486.1
Hypothetical protein; KEGG: cac:CA_C0035 1.7e-37 Serine/threonine phosphatase (inactivated protein); K01090 protein phosphatase; Psort location: Cytoplasmic, score: 8.96.
 
  0.864
KXB54901.1
KEGG: rho:RHOM_09995 6.7e-52 protein serine/threonine phosphatase; K01090 protein phosphatase; Psort location: Cytoplasmic, score: 8.96.
 
  0.864
KXB55598.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bpb:bpr_I0037 1.8e-74 two component system histidine kinase; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.845
KXB54869.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.773
KXB53957.1
Pyruvate kinase; KEGG: csh:Closa_0670 8.7e-162 pyruvate kinase K00873; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.751
KXB55035.1
Type VII secretion protein EssC; KEGG: ppo:PPM_p0073 8.4e-16 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 9.97.
  
 
 0.748
KXB58135.1
Ser/Thr phosphatase family protein; KEGG: lcb:LCABL_10090 2.4e-31 cpdA; 3, 5-cyclic-nucleotide phosphodiesterase; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.717
KXB60360.1
HD domain protein; KEGG: pru:PRU_1146 7.0e-34 inositol-1-monophosphatase/HD domain-containing protein K01092; Psort location: Cytoplasmic, score: 8.96.
    
  0.706
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.