STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB54923.1KEGG: smb:smi_1609 1.0e-215 type I restriction-modification system DNA methylase; K03427 type I restriction enzyme M protein; Psort location: Cytoplasmic, score: 8.96. (525 aa)    
Predicted Functional Partners:
KXB54918.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 0.995
KXB60175.1
KEGG: lay:LAB52_07120 1.4e-76 restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.978
KXB54921.1
KEGG: apj:APJL_0302 5.5e-112 putative type I restriction enzyme specificity protein; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
 
     0.948
KXB54922.1
Hypothetical protein; KEGG: pdn:HMPREF9137_0457 0.00090 purC_2; phosphoribosylaminoimidazole succinocarboxamide synthase.
  
    0.864
KXB60177.1
KEGG: cdl:CDR20291_2911 6.4e-63 restriction modification system dna specificity domain; K01154 type I restriction enzyme, S subunit; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.822
KXB60178.1
Helicase protein; KEGG: cls:CXIVA_04310 0. hypothetical protein; K01153 type I restriction enzyme, R subunit; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.626
KXB54919.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.608
KXB54920.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.608
KXB54924.1
Hypothetical protein; KEGG: ppo:PPM_0977 0.0019 yesN9; chemotaxis response regulator protein-glutamate methylesterase K07720.
       0.598
KXB60642.1
Death-on-curing family protein; KEGG: pdn:HMPREF9137_0457 5.3e-59 purC_2; phosphoribosylaminoimidazole succinocarboxamide synthase; Psort location: Cytoplasmic, score: 8.96.
  
    0.427
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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