STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB54493.1Phage terminase, large subunit, PBSX family; Psort location: Cytoplasmic, score: 8.96. (421 aa)    
Predicted Functional Partners:
KXB54494.1
Terminase small subunit domain protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.972
KXB54492.1
Putative phage portal protein, SPP1 Gp6; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.950
KXB54491.1
Phage protein F-like protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.949
KXB54489.1
Phage minor structural protein GP20; KEGG: edi:EDI_048910 0.0032 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
 
    0.852
KXB54482.1
Hypothetical protein.
 
    0.821
KXB54475.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.801
KXB54474.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.783
KXB54480.1
Phage XkdN-like protein.
 
    0.748
KXB54478.1
LysM domain protein; KEGG: mes:Meso_2725 1.5e-05 5'-nucleotidase-like; K01081 5'-nucleotidase.
 
    0.740
KXB54481.1
Hypothetical protein.
 
    0.711
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.