STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB54495.1Hypothetical protein. (49 aa)    
Predicted Functional Partners:
KXB54496.1
Hypothetical protein; KEGG: tex:Teth514_1664 0.0048 RNA polymerase sigma-28 subunit FliA/WhiG K02405; Psort location: Cytoplasmic, score: 8.96.
       0.531
KXB54497.1
Hypothetical protein; KEGG: csc:Csac_2039 0.0029 desulfoferrodoxin; K05919 superoxide reductase.
       0.531
KXB54498.1
Hypothetical protein; KEGG: psi:S70_05855 0.0057 alaS; alanyl-tRNA synthetase K01872; Psort location: Cytoplasmic, score: 8.96.
       0.531
KXB54499.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.520
KXB54493.1
Phage terminase, large subunit, PBSX family; Psort location: Cytoplasmic, score: 8.96.
       0.511
KXB54494.1
Terminase small subunit domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.511
KXB54491.1
Phage protein F-like protein; Psort location: Cytoplasmic, score: 8.96.
       0.495
KXB54492.1
Putative phage portal protein, SPP1 Gp6; Psort location: Cytoplasmic, score: 8.96.
       0.495
KXB54500.1
KEGG: afd:Alfi_2693 2.3e-28 PAPS reductase/FAD synthetase family protein; K00390 phosphoadenosine phosphosulfate reductase; Psort location: Cytoplasmic, score: 8.96.
       0.422
KXB54501.1
Hypothetical protein.
       0.422
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.