STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB54529.1Putative toxin-antitoxin system, toxin component; KEGG: bme:BMEI1683 5.8e-05 zinc-dependent metallopeptidase K01417; Psort location: Cytoplasmic, score: 8.96. (140 aa)    
Predicted Functional Partners:
KXB54528.1
Toxin-antitoxin system, antitoxin component, Xre family; KEGG: asm:MOUSESFB_0090 4.6e-06 XRE family transcriptional regulator; K01356 repressor LexA.
 
    0.877
KXB54532.1
Site-specific recombinase, phage integrase family; KEGG: pfe:PSF113_1062 0.00010 xerD; XerD protein K04763; Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family.
 
  
 0.761
KXB54527.1
Toxin-antitoxin system, antitoxin component, Xre family; KEGG: asm:MOUSESFB_0090 5.2e-05 XRE family transcriptional regulator; K01356 repressor LexA.
 
    0.597
KXB54530.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.529
KXB54531.1
Abi-like protein; Psort location: Cytoplasmic, score: 8.96.
       0.470
KXB54525.1
Phage antirepressor protein; Psort location: Cytoplasmic, score: 8.96.
       0.465
KXB54524.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.452
KXB54526.1
Hypothetical protein.
       0.452
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.