STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB54072.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (259 aa)    
Predicted Functional Partners:
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
  
   0.791
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.778
KXB53557.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 6.3e-28 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
    
  0.778
KXB54073.1
Cell wall-binding repeat protein; KEGG: bst:GYO_0417 2.3e-24 endopeptidase LytF K03791.
       0.773
KXB54074.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.772
KXB54075.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.686
KXB54076.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.551
KXB54071.1
ISPs1, transposase OrfA; KEGG: bid:Bind_3797 5.6e-10 mannitol dehydrogenase domain-containing protein; K00045 mannitol 2-dehydrogenase.
       0.520
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
   0.461
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.