STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB54074.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (192 aa)    
Predicted Functional Partners:
KXB54072.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB54073.1
Cell wall-binding repeat protein; KEGG: bst:GYO_0417 2.3e-24 endopeptidase LytF K03791.
       0.773
KXB54075.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.693
KXB54076.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.551
KXB54071.1
ISPs1, transposase OrfA; KEGG: bid:Bind_3797 5.6e-10 mannitol dehydrogenase domain-containing protein; K00045 mannitol 2-dehydrogenase.
       0.520
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.