STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB54017.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (168 aa)    
Predicted Functional Partners:
KXB53557.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 6.3e-28 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
    
  0.834
KXB54018.1
Putative stage 0 sporulation protein J; KEGG: pub:SAR11_0354 5.8e-46 parB; chromosome partitioning protein K03497; Psort location: Cytoplasmic, score: 9.94; Belongs to the ParB family.
  
 
 0.831
KXB54019.1
Sporulation initiation inhibitor protein Soj; KEGG: apb:SAR116_1648 8.6e-68 chromosome partitioning protein ParA K03496; Psort location: Cytoplasmic, score: 9.12.
  
  
 0.813
scpA
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
 
 0.802
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
  0.786
KXB55598.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bpb:bpr_I0037 1.8e-74 two component system histidine kinase; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
  0.759
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
   
 
  0.750
KXB54020.1
Hypothetical protein; KEGG: ava:Ava_2037 7.1e-09 alpha/beta hydrolase fold protein K01563.
   
   0.673
KXB59203.1
Hypothetical protein.
 
 
   0.635
KXB53502.1
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.606
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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