STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53945.1Addiction module toxin, Txe/YoeB family; KEGG: stj:SALIVA_1682 4.5e-23 yoeB; Toxin yoeB. (85 aa)    
Predicted Functional Partners:
KXB53944.1
Addiction module antitoxin, RelB/DinJ family.
       0.781
KXB60763.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.517
KXB60797.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 
 0.517
KXB57411.1
Toxin-antitoxin system, antitoxin component, PHD family.
  
 
 0.517
KXB53448.1
Prevent-host-death family protein.
  
 
 0.517
KXB53943.1
KEGG: csh:Closa_1089 0. DNA polymerase III subunit alpha K02337; Psort location: Cytoplasmic, score: 9.97.
       0.510
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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