STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53947.1Hypothetical protein; KEGG: llk:LLKF_0779 9.7e-06 srtC; sortase; K07284 sortase A; Psort location: Cytoplasmic, score: 8.96. (157 aa)    
Predicted Functional Partners:
KXB53946.1
Hypothetical protein.
       0.801
KXB53948.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.801
KXB53949.1
Peptidase, S54 family; KEGG: cin:100186499 5.8e-11 similar to rhomboid-related protein 2; K02857 rhomboid-related protein 1/2/3; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXB53950.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.689
KXB59151.1
Helix-turn-helix domain of resolvase.
  
     0.537
KXB56145.1
Fic family protein; KEGG: bsa:Bacsa_1437 1.7e-06 transcriptional regulator; K03655 ATP-dependent DNA helicase RecG; Psort location: Cytoplasmic, score: 8.96.
  
     0.480
KXB53539.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.464
KXB56856.1
Toxin-antitoxin system, toxin component, RelE domain protein.
  
     0.449
KXB54895.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.421
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.