STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53949.1Peptidase, S54 family; KEGG: cin:100186499 5.8e-11 similar to rhomboid-related protein 2; K02857 rhomboid-related protein 1/2/3; Psort location: CytoplasmicMembrane, score: 10.00. (193 aa)    
Predicted Functional Partners:
KXB53946.1
Hypothetical protein.
       0.773
KXB53947.1
Hypothetical protein; KEGG: llk:LLKF_0779 9.7e-06 srtC; sortase; K07284 sortase A; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB53948.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB53950.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.689
KXB52971.1
SPFH/Band 7/PHB domain protein; KEGG: reh:H16_A2036 4.1e-52 h16_A2036; membrane protease subunits, stomatin/prohibitin homologs.
   
 0.515
KXB56813.1
Cell wall-binding repeat protein; KEGG: snm:SP70585_1005 4.4e-18 endo-beta-N-acetylglucosaminidase; K01227 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase.
  
     0.477
KXB57480.1
Toxic anion resistance protein TelA; KEGG: edi:EDI_204390 0.00010 myosin-2 heavy chain, non muscle; Psort location: Cytoplasmic, score: 8.96; Belongs to the TelA family.
 
     0.459
ddl
D-ala D-ala ligase protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
     0.452
KXB53494.1
KEGG: nmr:Nmar_1118 1.1e-19 5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase; Psort location: Cytoplasmic, score: 8.96.
  
    0.437
KXB60380.1
N-acetylmuramoyl-L-alanine amidase; KEGG: cpy:Cphy_2080 2.0e-08 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase.
   
   0.424
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.