STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53955.1Acetyltransferase, GNAT family; KEGG: lsp:Bsph_3263 3.9e-06 spermidine N(1)-acetyltransferase; K00657 diamine N-acetyltransferase; Psort location: Cytoplasmic, score: 8.96. (208 aa)    
Predicted Functional Partners:
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
    
  0.885
KXB53956.1
Putative peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.773
KXB53574.1
Prephenate dehydratase; KEGG: bpb:bpr_I1730 1.8e-74 pheA; chorismate mutase K14170; Psort location: Cytoplasmic, score: 9.97.
    
  0.742
argD
Putative succinylornithine transaminase; KEGG: csh:Closa_3283 3.0e-136 acetylornithine and succinylornithine aminotransferase; K00821 acetylornithine/N-succinyldiaminopimelate aminotransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
   
 
 0.739
KXB56810.1
Aminotransferase, class I/II; KEGG: cpf:CPF_1295 2.3e-58 threonine-phosphate decarboxylase; Psort location: Cytoplasmic, score: 9.97.
     
  0.733
accA
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
     
  0.730
KXB60757.1
Chorismate mutase; KEGG: cno:NT01CX_0622 2.3e-19 chorismate mutase; K04093 chorismate mutase.
    
  0.703
aroK-2
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.618
KXB60503.1
Putative aspartate transaminase; KEGG: bpb:bpr_I2837 6.2e-152 aspartate/tyrosine/aromatic aminotransferase; K10907 aminotransferase; Psort location: Cytoplasmic, score: 9.97.
     
  0.609
KXB53584.1
Aminotransferase, class I/II; KEGG: cbl:CLK_0457 3.2e-109 aspartate aminotransferase; K11358 aspartate aminotransferase; Psort location: Cytoplasmic, score: 9.97.
     
  0.609
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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