STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53969.1Transporter, major facilitator family protein; KEGG: eci:UTI89_C4210 1.6e-34 yicJ; transporter K03292; Psort location: CytoplasmicMembrane, score: 10.00. (457 aa)    
Predicted Functional Partners:
KXB53970.1
Beta galactosidase small chain; KEGG: rho:RHOM_10625 0. glycoside hydrolase family protein; K01190 beta-galactosidase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.934
KXB53971.1
Transcriptional regulator, AraC family; KEGG: btc:CT43_CH3681 1.2e-11 adaA; ADA regulatory protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.874
KXB57338.1
Glycosyl hydrolase family 2, sugar binding domain protein; KEGG: pjd:Pjdr2_4080 6.8e-162 beta-galactosidase K01190; Psort location: Cytoplasmic, score: 8.96; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.494
KXB58057.1
KEGG: ere:EUBREC_1385 1.4e-273 beta-galactosidase; K01190 beta-galactosidase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.428
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.