STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53970.1Beta galactosidase small chain; KEGG: rho:RHOM_10625 0. glycoside hydrolase family protein; K01190 beta-galactosidase; Psort location: Cytoplasmic, score: 8.96. (1007 aa)    
Predicted Functional Partners:
KXB53969.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C4210 1.6e-34 yicJ; transporter K03292; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.934
KXB60473.1
Alpha-galactosidase; KEGG: scc:Spico_1068 9.5e-188 alpha-galactosidase; K07407 alpha-galactosidase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.912
KXB58057.1
KEGG: ere:EUBREC_1385 1.4e-273 beta-galactosidase; K01190 beta-galactosidase; Psort location: Cytoplasmic, score: 8.96.
  
  
0.853
KXB53533.1
Putative aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.822
uxaC
KEGG: csh:Closa_1651 1.9e-180 glucuronate isomerase K01812.
  
 
 0.789
KXB53971.1
Transcriptional regulator, AraC family; KEGG: btc:CT43_CH3681 1.2e-11 adaA; ADA regulatory protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
  
  0.736
KXB56165.1
Putative L-ribulose-5-phosphate 4-epimerase; KEGG: ssf:SSUA7_0857 2.6e-82 L-fuculose phosphate aldolase; K01628 L-fuculose-phosphate aldolase; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.720
KXB58067.1
Putative glucokinase; KEGG: csh:Closa_0073 3.0e-104 ROK family glucokinase; K00845 glucokinase; Psort location: Cytoplasmic, score: 9.97.
     
 0.718
KXB57155.1
Putative glucokinase; KEGG: tep:TepRe1_2104 3.8e-58 glucokinase; Psort location: Cytoplasmic, score: 9.97.
     
 0.718
KXB60660.1
1-phosphofructokinase; KEGG: aur:HMPREF9243_1310 3.0e-72 pfkB; 1-phosphofructokinase K00882; Psort location: Cytoplasmic, score: 9.97; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
    0.666
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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