STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53971.1Transcriptional regulator, AraC family; KEGG: btc:CT43_CH3681 1.2e-11 adaA; ADA regulatory protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.97. (278 aa)    
Predicted Functional Partners:
KXB56900.1
KEGG: csh:Closa_1699 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase.
  
 0.882
KXB53969.1
Transporter, major facilitator family protein; KEGG: eci:UTI89_C4210 1.6e-34 yicJ; transporter K03292; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.874
KXB60757.1
Chorismate mutase; KEGG: cno:NT01CX_0622 2.3e-19 chorismate mutase; K04093 chorismate mutase.
  
 
 0.751
KXB53574.1
Prephenate dehydratase; KEGG: bpb:bpr_I1730 1.8e-74 pheA; chorismate mutase K14170; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.751
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.743
KXB53970.1
Beta galactosidase small chain; KEGG: rho:RHOM_10625 0. glycoside hydrolase family protein; K01190 beta-galactosidase; Psort location: Cytoplasmic, score: 8.96.
 
  
  0.736
accA
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
 
  
  0.720
KXB52855.1
KEGG: eel:EUBELI_01065 3.3e-114 phosphate acetyltransferase; K00625 phosphate acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
     
 0.696
KXB57474.1
PPR repeat protein; KEGG: kol:Kole_1440 1.1e-11 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
 
   0.637
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
 0.626
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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