STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53973.1ABC transporter, ATP-binding protein; KEGG: dku:Desku_2823 1.4e-60 sulfate-transporting ATPase; Psort location: Cytoplasmic, score: 9.12. (242 aa)    
Predicted Functional Partners:
KXB53972.1
Hypothetical protein; KEGG: fbc:FB2170_07914 0.0051 putative NADH dehydrogenase subunit N; K00343 NADH-quinone oxidoreductase subunit N; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.958
KXB60382.1
Nodulation ATP-binding protein I family protein; KEGG: cle:Clole_1035 6.4e-31 molydate ABC transporter ATPase; Psort location: Cytoplasmic, score: 9.12.
 
  
 
0.929
ecfA
ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.910
KXB60785.1
KEGG: ccm:Ccan_09160 6.9e-66 ABC transporter ATP-binding protein yknY K02003; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 
0.909
ecfA-2
Cobalt ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.909
potA
Putative spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
   
 
0.905
KXB56340.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_0918 4.9e-88 sugar ABC transporter ATPase K01995.
 
   
 
0.904
KXB57394.1
KEGG: sgo:SGO_2099 9.3e-55 ABC transporter ATP-binding protein K15600; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 
0.898
KXB57202.1
KEGG: ssr:SALIVB_0302 9.4e-46 cbiO; cobalt import ATP-binding protein cbiO K02006; Psort location: CytoplasmicMembrane, score: 9.59.
 
  
 
0.886
KXB56372.1
ABC transporter, ATP-binding protein; KEGG: ctx:Clo1313_2345 1.5e-191 ABC transporter; K02056 simple sugar transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
     
0.830
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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