STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53702.1Putative oligopeptide transport system permease protein OppB; KEGG: csc:Csac_1028 2.2e-92 Nickel-transporting ATPase K15581; Psort location: CytoplasmicMembrane, score: 10.00. (333 aa)    
Predicted Functional Partners:
KXB53701.1
ABC transporter, permease protein; KEGG: bra:BRADO1095 5.7e-39 oppC; peptide ABC transporter membrane protein K02034; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.988
KXB57777.1
Putative dipeptide ABC transporter, permease protein DppC; KEGG: bmi:BMEA_B0781 2.4e-56 nikC; nickel transporter permease NikC K15586; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.982
KXB53699.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_1450 5.6e-103 peptide ABC transporter ATPase K10823; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.982
KXB53700.1
Oligopeptide ABC transporter, ATP-binding protein OppD; KEGG: gth:Geoth_2280 1.6e-98 oligopeptide/dipeptide ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 9.99.
 0.981
KXB53698.1
Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 7.5e-53 4-phytase; Psort location: Periplasmic, score: 10.00.
 
 0.974
KXB56313.1
ABC transporter, substrate-binding protein, family 5; KEGG: gwc:GWCH70_0479 2.5e-61 4-phytase K02035; Psort location: Periplasmic, score: 9.44.
 0.969
KXB57780.1
ABC transporter, ATP-binding protein; KEGG: lan:Lacal_1101 6.2e-49 Fe(3+)-transporting ATPase K02031:K02032; Psort location: CytoplasmicMembrane, score: 9.98.
 
 0.959
KXB53832.1
Periplasmic oligopeptide-binding family protein; KEGG: esi:Exig_2057 2.5e-52 4-phytase; Psort location: Periplasmic, score: 10.00.
 
 0.952
KXB56316.1
Putative oligopeptide ABC transporter, ATP-binding protein OppD; KEGG: tep:TepRe1_1901 1.5e-84 peptide ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 7.88.
 0.949
KXB56315.1
Putative oligopeptide ABC transporter, permease protein OppC; KEGG: bmi:BMEA_B0781 4.5e-55 nikC; nickel transporter permease NikC K15586; Psort location: CytoplasmicMembrane, score: 10.00.
 
0.944
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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