STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53460.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (192 aa)    
Predicted Functional Partners:
KXB53461.1
Hypothetical protein; KEGG: edi:EDI_048910 1.5e-10 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
 
    0.981
KXB53459.1
Putative inner membrane protein DUF1819; Psort location: Cytoplasmic, score: 8.96.
 
    0.971
KXB53463.1
Hypothetical protein; KEGG: ljf:FI9785_1029 7.9e-216 putative Type II restriction enzyme, methylase subunits.
 
    0.919
KXB53464.1
TIGR02687 family protein; KEGG: tet:TTHERM_01109810 0.0095 Tubulin-tyrosine ligase family protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.872
KXB56360.1
Hypothetical protein; KEGG: ljf:FI9785_1029 3.5e-229 putative Type II restriction enzyme, methylase subunits; Psort location: Cytoplasmic, score: 8.96.
 
    0.867
KXB53458.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.651
KXB57344.1
Putative fibronectin-binding protein; KEGG: stk:STP_0474 0.00012 v-type sodium ATP synthase subunit I; K02123 V-type H+-transporting ATPase subunit I; Psort location: Cytoplasmic, score: 8.96.
  
    0.622
KXB53457.1
Putative thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
       0.600
KXB60635.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.587
KXB53462.1
KEGG: clo:HMPREF0868_0115 3.1e-198 divergent AAA domain-containing protein; K03655 ATP-dependent DNA helicase RecG; Psort location: Cytoplasmic, score: 8.96.
       0.535
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.