STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53491.1Pyridine nucleotide-disulfide oxidoreductase family protein; KEGG: gox:GOX1630 2.0e-59 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.96. (538 aa)    
Predicted Functional Partners:
KXB53490.1
Flavoprotein family protein; KEGG: bsu:BSU30060 6.1e-35 ytfP; NAD(FAD) dehydrogenase K07007.
     
 0.849
KXB53487.1
PhoH family protein; KEGG: ttu:TERTU_3875 1.5e-72 phosphate starvation-inducible protein PhoH family protein, ATPase K06217; Psort location: Cytoplasmic, score: 9.97.
  
    0.837
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
       0.836
KXB53489.1
Polysaccharide biosynthesis protein; KEGG: ssr:SALIVB_0347 8.0e-23 cystathionine gamma-synthase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.835
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
       0.803
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
       0.795
KXB53494.1
KEGG: nmr:Nmar_1118 1.1e-19 5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase; Psort location: Cytoplasmic, score: 8.96.
  
    0.795
miaB
tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.776
KXB53493.1
Hypothetical protein.
       0.769
KXB53499.1
Aluminum resistance protein; KEGG: bqy:MUS_1917 4.3e-112 ynbB; cystathionine gamma-lyase; Psort location: Cytoplasmic, score: 8.96.
       0.735
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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