STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53544.1Hypothetical protein; KEGG: ave:Arcve_0113 0.0070 PyrE-like protein; K00762 orotate phosphoribosyltransferase; Psort location: Cytoplasmic, score: 8.96. (167 aa)    
Predicted Functional Partners:
KXB53543.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
      0.947
KXB53542.1
Radical SAM domain protein; KEGG: pmz:HMPREF0659_A5139 7.2e-13 anaerobic sulfatase maturase K06871; Psort location: Cytoplasmic, score: 8.96.
       0.779
KXB53541.1
Ankyrin repeat protein; KEGG: phu:Phum_PHUM288780 0.00029 ankyrin repeat-containing protein, putative; Psort location: Cytoplasmic, score: 8.96.
       0.778
KXB53545.1
ADP-ribosylglycohydrolase; KEGG: cls:CXIVA_07340 4.2e-82 hypothetical protein; K05521 ADP-ribosylglycohydrolase.
       0.709
KXB53546.1
Acyltransferase; KEGG: bmd:BMD_4022 2.7e-14 putative acyltransferase domain-containing protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.508
KXB53540.1
Hypothetical protein; KEGG: cao:Celal_2311 0.0091 aspartate transaminase K00812.
       0.451
fbp
KEGG: ere:EUBREC_0921 2.9e-264 fructose-1,6-bisphosphatase; K04041 fructose-1,6-bisphosphatase III; Psort location: Cytoplasmic, score: 8.96.
       0.422
KXB53539.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.422
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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