STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53568.1Aspartate carbamoyltransferase regulatory chain, allosteric domain protein; KEGG: rho:RHOM_10050 9.4e-46 aspartate carbamoyltransferase regulatory subunit K00610; Psort location: Cytoplasmic, score: 8.96. (144 aa)    
Predicted Functional Partners:
pyrB
KEGG: csh:Closa_2185 2.2e-133 aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 0.999
carA
KEGG: csh:Closa_1281 2.5e-141 carbamoyl-phosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarA family.
  
 
 0.971
carB
KEGG: csh:Closa_1282 0. carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarB family.
  
 
  0.970
pyrF
KEGG: csh:Closa_1598 9.0e-112 orotidine 5'-phosphate decarboxylase K01591; Psort location: Cytoplasmic, score: 8.96; Belongs to the OMP decarboxylase family. Type 2 subfamily.
  
 
  0.958
pyrC
Putative dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
    
 0.950
KXB60018.1
ATP-grasp domain protein; KEGG: fsu:Fisuc_2651 5.6e-119 carbamoyl phosphate synthase-like protein; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.936
KXB59161.1
ATP-grasp domain protein; KEGG: rho:RHOM_11995 4.6e-76 carbamoyl phosphate synthase-like protein; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.936
KXB52573.1
Carbamate kinase; KEGG: bhy:BHWA1_00063 7.8e-106 arcC; carbamate kinase; K00926 carbamate kinase; Psort location: Cytoplasmic, score: 9.97.
 
  
  0.907
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
 0.895
KXB60363.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
  0.816
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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