STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53593.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (443 aa)    
Predicted Functional Partners:
KXB53592.1
6-O-methylguanine DNA methyltransferase, DNA binding domain protein; KEGG: bpb:bpr_I0662 1.9e-77 ogt; methylated-DNA-protein-cysteine S-methyltransferase Ogt; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB53594.1
Putative membrane protein; KEGG: pmq:PM3016_6450 0.0037 sirohydrochlorin cobaltochelatase; K03795 sirohydrochlorin cobaltochelatase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXB53477.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.764
KXB53591.1
KEGG: apb:SAR116_0035 1.1e-65 ammonium transporter K03320; Psort location: CytoplasmicMembrane, score: 10.00.
       0.701
KXB60783.1
Hypothetical protein; KEGG: cex:CSE_02000 0.00032 putative nucleotidase.
  
     0.564
KXB53967.1
Putative CoA-substrate-specific enzyme activase; KEGG: bbp:BBPR_0457 0. (R)-2-hydroxyglutaryl-CoA dehydratase activator; Psort location: Cytoplasmic, score: 8.96.
 
     0.539
KXB53590.1
Hypothetical protein; KEGG: btl:BALH_4453 2.7e-07 DNA-7-methylguanine glycosylase; Psort location: Cytoplasmic, score: 8.96.
       0.460
KXB53139.1
Transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
       0.430
KXB61232.1
Hypothetical protein; KEGG: bpu:BPUM_3702 2.1e-18 ybbA; esterase.
  
     0.414
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.