STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB53148.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (503 aa)    
Predicted Functional Partners:
KXB53149.1
Putative mutacin ABC transporter, ATP-binding protein MutF; KEGG: ppo:PPM_1418 7.0e-57 ccmA3; multidrug ABC transporter ATPase K09687; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.934
KXB53152.1
Histidine kinase A domain protein; KEGG: awo:Awo_c00680 5.5e-41 two-component system sensor kinase; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.862
KXB56949.1
Erythromycin esterase; KEGG: gfo:GFO_0918 3.3e-22 ereB; erythromycin esterase type II K01066; Psort location: Cytoplasmic, score: 8.96.
  
     0.744
KXB60171.1
WD domain, G-beta repeat protein; KEGG: hhy:Halhy_6674 1.2e-09 (myosin heavy-chain) kinase; Psort location: OuterMembrane, score: 9.49.
  
     0.735
KXB60801.1
Cell wall-binding repeat protein; KEGG: cbe:Cbei_3870 3.7e-20 glycosyl hydrolase family 32 protein; K03332 fructan beta-fructosidase.
  
     0.692
KXB57422.1
Hypothetical protein.
  
     0.622
KXB53151.1
Putative sensory transduction protein RegX3; KEGG: bbp:BBPR_1604 7.2e-32 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
 
     0.593
KXB57709.1
Hypothetical protein; KEGG: scl:sce8204 7.6e-18 helicase.
  
     0.548
KXB57164.1
ABC transporter, solute-binding protein; KEGG: bsa:Bacsa_2386 0.0064 Trans-hexaprenyltranstransferase K02523.
  
     0.521
KXB56135.1
Helicase protein; KEGG: scl:sce8204 1.8e-57 helicase; Psort location: Cytoplasmic, score: 8.96.
  
     0.495
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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