STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB52842.1KEGG: rlt:Rleg2_4805 2.5e-35 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00. (449 aa)    
Predicted Functional Partners:
KXB53515.1
Hypothetical protein; KEGG: eel:EUBELI_01147 6.7e-68 cytidylate kinase; K00945 cytidylate kinase.
      0.900
KXB55573.1
Hypothetical protein; KEGG: ere:EUBREC_1730 7.2e-32 cytidylate kinase; K00945 cytidylate kinase; Psort location: Cytoplasmic, score: 8.96.
      0.890
KXB52840.1
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
       0.773
KXB52841.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXB52839.1
KEGG: sri:SELR_26700 7.6e-12 hpr; putative phosphocarrier protein HPr K11189; Psort location: Cytoplasmic, score: 9.26.
       0.741
KXB52835.1
Hypothetical protein.
       0.716
KXB52836.1
Hypothetical protein; KEGG: lbj:LBJ_1060 0.0039 adenylate cyclase-like protein; K01768 adenylate cyclase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.716
dacA
TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
       0.716
KXB52838.1
YbbR-like protein; KEGG: bya:BANAU_0179 1.4e-13 ybbR; Replicase polyprotein 1ab pp1ab; Psort location: OuterMembrane, score: 9.49.
       0.716
KXB57363.1
MATE efflux family protein; KEGG: ssr:SALIVB_2015 1.9e-20 queuine tRNA-ribosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.539
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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