STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB52898.1Cupin domain protein; KEGG: fnu:FN0550 8.1e-08 mannose-1-phosphate guanylyltransferase. (117 aa)    
Predicted Functional Partners:
KXB59220.1
KEGG: csh:Closa_0578 5.8e-172 undecaprenyl-phosphate glucose phosphotransferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.938
KXB55371.1
D,D-heptose 1,7-bisphosphate phosphatase; KEGG: sri:SELR_05920 7.2e-103 hypothetical protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.860
KXB60414.1
KEGG: cbt:CLH_2581 2.7e-222 5-methyltetrahydrofolate--homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
  
  0.786
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.773
KXB59520.1
Glycosyltransferase, group 2 family protein; KEGG: nde:NIDE3430 8.8e-114 putative methyltransferase and glycosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.724
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 
  0.707
KXB52896.1
Hypothetical protein.
       0.705
KXB60029.1
Nucleotide sugar dehydrogenase; KEGG: llr:llh_0455 1.8e-170 UDP-glucose dehydrogenase K00012; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.676
pgi
KEGG: csh:Closa_0057 5.6e-190 glucose-6-phosphate isomerase K01810; Psort location: Cytoplasmic, score: 9.97; Belongs to the GPI family.
    
 0.649
KXB60028.1
NAD dependent epimerase/dehydratase family protein; KEGG: sud:ST398NM01_0168 5.4e-82 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.648
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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