STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB52917.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (287 aa)    
Predicted Functional Partners:
KXB55756.1
Hypothetical protein; KEGG: fnu:FN0522 4.9e-06 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.806
KXB55757.1
Hypothetical protein.
 
   
 0.794
KXB55762.1
TraG/TraD family protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.791
KXB55755.1
NlpC/P60 family protein; KEGG: bmd:BMD_3550 1.4e-20 putative protease NlpC/P60 family; Psort location: Cytoplasmic, score: 8.96.
 
     0.786
KXB55760.1
Hypothetical protein.
 
     0.782
KXB52900.1
Hypothetical protein.
 
     0.782
KXB55751.1
Helicase protein; KEGG: ase:ACPL_5928 1.7e-165 F-box DNA helicase protein 1; Psort location: OuterMembrane, score: 9.49.
 
     0.781
KXB55764.1
Hypothetical protein; KEGG: edi:EDI_119900 4.9e-07 DNA double-strand break repair Rad50 ATPase.
 
    0.778
KXB55753.1
Hypothetical protein; KEGG: mpe:MYPE6470 9.1e-06 DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A.
 
     0.776
KXB52916.1
Hypothetical protein.
       0.752
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.