STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potAPutative spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (358 aa)    
Predicted Functional Partners:
KXB52936.1
ABC transporter, permease protein; KEGG: ebe:B21_00867 1.4e-42 potH; potH, subunit of putrescine ABC transporter K11075; Psort location: CytoplasmicMembrane, score: 10.00.
 0.996
KXB52937.1
ABC transporter, permease protein; KEGG: cpy:Cphy_0895 4.0e-93 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.994
KXB52938.1
KEGG: ebe:B21_01129 2.4e-63 potD; potD, subunit of putrescine/spermidine ABC transporter K11069; Psort location: Periplasmic, score: 10.00.
 
 0.986
KXB61179.1
Putative spermidine/putrescine ABC transporter, permease protein PotC; KEGG: dba:Dbac_1847 2.3e-51 ornithine carbamoyltransferase K11070; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.976
KXB61180.1
Putative spermidine/putrescine ABC transporter, permease protein PotB; KEGG: ebe:B21_01131 2.0e-59 potB; potB, subunit of putrescine/spermidine ABC transporter K11071; Psort location: CytoplasmicMembrane, score: 10.00.
 0.975
KXB61178.1
ABC transporter, solute-binding protein; KEGG: ebe:B21_01129 4.4e-48 potD; potD, subunit of putrescine/spermidine ABC transporter K11069; Psort location: Periplasmic, score: 9.44.
 
 0.944
KXB60846.1
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
 0.919
KXB53973.1
ABC transporter, ATP-binding protein; KEGG: dku:Desku_2823 1.4e-60 sulfate-transporting ATPase; Psort location: Cytoplasmic, score: 9.12.
 
   
 
0.905
KXB60657.1
ABC transporter, ATP-binding protein; KEGG: hiq:CGSHiGG_06600 1.6e-96 aroE; shikimate 5-dehydrogenase K06148; Psort location: CytoplasmicMembrane, score: 10.00.
 
     
0.899
KXB57289.1
ABC transporter, ATP-binding protein; KEGG: cbi:CLJ_B1644 6.0e-83 putative multidrug export ATP-binding/permease K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 
0.899
Your Current Organism:
Lachnoanaerobaculum saburreum
NCBI taxonomy Id: 467210
Other names: ATCC 33271, CCUG 28089, CIP 105341, Catenabacterium saburreum, DSM 3986, Eubacterium saburreum, JCM 11021, L. saburreum, Leptotrichia aerogenes, VPI 11763
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