STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00010024RECA_2 domain-containing protein. (371 aa)    
Predicted Functional Partners:
pdam_00005602
3'-5' exonuclease domain-containing protein.
  
 0.988
pdam_00006474
Uncharacterized protein.
  
 0.988
pdam_00023401
RECA_2 domain-containing protein.
  
0.982
pdam_00003425
RECA_2 domain-containing protein.
   
 0.978
pdam_00013818
Uncharacterized protein.
   
 0.969
pdam_00002897
RECA_2 domain-containing protein.
  
 
0.966
pdam_00009711
Tower domain-containing protein.
   
 0.963
pdam_00022346
Uncharacterized protein.
    
 0.919
pdam_00018370
Uncharacterized protein.
  
 0.918
pdam_00021595
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
  
 0.908
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.