STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00014996Uncharacterized protein. (1364 aa)    
Predicted Functional Partners:
pdam_00012022
STN1_2 domain-containing protein.
    
 0.987
pdam_00003449
Uncharacterized protein.
    
 0.985
pdam_00003417
DNA_pol_alpha_N domain-containing protein.
   
 0.827
pdam_00003421
zf-DNA_Pol domain-containing protein.
   
 0.827
pdam_00018968
RPA_C domain-containing protein.
    
 0.806
pdam_00022605
Uncharacterized protein.
    
 0.806
pdam_00002878
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
    
 0.775
pdam_00008403
Telo_bind domain-containing protein.
    
 0.692
pdam_00009533
Telo_bind domain-containing protein.
    
 0.692
pdam_00019135
HTH myb-type domain-containing protein.
     
 0.689
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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