STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00010700Uncharacterized protein. (150 aa)    
Predicted Functional Partners:
pdam_00012021
Mab-21 domain-containing protein.
  
 
 0.944
pdam_00021086
Uncharacterized protein.
    
 0.897
pdam_00011761
tRNA-synt_1e domain-containing protein.
  
  
 0.844
pdam_00015858
PRA-CH domain-containing protein.
     
 0.806
pdam_00015997
Uncharacterized protein; Belongs to the ALAD family.
     
 0.763
pdam_00011578
Uncharacterized protein.
     
 0.677
pdam_00002924
Uncharacterized protein.
     
 0.677
pdam_00003236
cGMP-dependent protein kinase.
    
  0.625
pdam_00007824
Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.
     
 0.625
pdam_00006435
cGMP-dependent protein kinase.
    
  0.625
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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