STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00020533Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
pdam_00006206
Guanylate kinase-like domain-containing protein.
    
 
 0.827
pdam_00010740
Uncharacterized protein.
    
 
 0.582
pdam_00003351
Uncharacterized protein.
      
 0.580
pdam_00021346
Uncharacterized protein.
    
 
 0.516
pdam_00013303
Uncharacterized protein.
    
 
 0.516
pdam_00018996
Uncharacterized protein.
    
 
 0.514
pdam_00005199
Uncharacterized protein.
    
   0.513
pdam_00021850
Uncharacterized protein.
    
   0.513
pdam_00009873
Uncharacterized protein.
    
   0.513
pdam_00000804
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.513
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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