STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00006589Uncharacterized protein. (365 aa)    
Predicted Functional Partners:
pdam_00018403
AAA domain-containing protein.
 
 
    0.696
pdam_00000288
Uncharacterized protein.
   
    0.694
pdam_00001854
Uncharacterized protein; Belongs to the complex I 49 kDa subunit family.
   
    0.620
pdam_00003401
cobW domain-containing protein.
 
      0.616
pdam_00005805
Uncharacterized protein.
   
    0.608
pdam_00005180
Uncharacterized protein.
      
 0.604
pdam_00011310
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
    0.595
pdam_00017955
Uncharacterized protein.
 
      0.586
pdam_00020151
Uncharacterized protein.
   
  
 0.537
pdam_00004873
Uncharacterized protein.
      
 0.529
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
Server load: low (26%) [HD]