STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00008176Uncharacterized protein. (668 aa)    
Predicted Functional Partners:
pdam_00006892
Uncharacterized protein.
   
0.990
pdam_00025297
Uncharacterized protein.
    
 0.981
pdam_00005602
3'-5' exonuclease domain-containing protein.
   
 0.975
pdam_00006474
Uncharacterized protein.
   
 0.975
pdam_00001354
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.964
pdam_00009711
Tower domain-containing protein.
   
 0.950
pdam_00022099
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.948
pdam_00017462
Ubiquitin carboxyl-terminal hydrolase.
    
 0.948
pdam_00009518
Ubiquitin carboxyl-terminal hydrolase.
    
 0.948
pdam_00017368
Uncharacterized protein.
     
 0.943
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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