STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00025152Fe-ADH domain-containing protein. (472 aa)    
Predicted Functional Partners:
pdam_00019515
PKS_ER domain-containing protein.
  
 0.964
pdam_00022046
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 0.964
pdam_00016494
AcetylCoA_hyd_C domain-containing protein.
  
 
 0.907
pdam_00000288
Uncharacterized protein.
    
 0.883
pdam_00002231
SCP2 domain-containing protein.
  
 0.868
pdam_00011292
Pyruvate carboxyltransferase domain-containing protein.
    
 0.858
pdam_00018268
Beta_elim_lyase domain-containing protein.
    
 0.804
pdam_00003200
Uncharacterized protein.
     
 0.783
pdam_00016405
6-phosphofructokinase; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade "E" sub-subfamily.
  
  
 0.776
pdam_00015858
PRA-CH domain-containing protein.
     
 0.774
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.