STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00003971Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (424 aa)    
Predicted Functional Partners:
pdam_00003833
Uncharacterized protein.
  
 
 0.999
pdam_00012840
KH type-2 domain-containing protein.
  
 
 0.999
pdam_00004284
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.999
pdam_00003348
Uncharacterized protein.
   
 
 0.999
pdam_00016288
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
  
 0.999
pdam_00008183
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.999
pdam_00017906
Uncharacterized protein.
  
 
 0.999
pdam_00003997
Uncharacterized protein.
  
 
 0.999
pdam_00008054
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
 
 0.999
pdam_00016003
Uncharacterized protein.
  
 0.999
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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