STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00018495Uncharacterized protein. (702 aa)    
Predicted Functional Partners:
pdam_00017441
Uncharacterized protein.
   
 
 0.831
pdam_00015404
Uncharacterized protein.
   
  
 0.622
pdam_00022099
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.601
pdam_00025796
Uncharacterized protein.
    
 
 0.548
pdam_00014064
ATP-synt_ab_N domain-containing protein.
    
 
 0.548
pdam_00014062
ATP-synt_ab domain-containing protein.
    
 
 0.548
pdam_00010070
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
   
  
 0.544
pdam_00018638
Uncharacterized protein.
      
 0.533
pdam_00025797
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.509
pdam_00007988
Nbl1_Borealin_N domain-containing protein.
    
 
 0.509
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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