STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00014356Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
pdam_00025671
Uncharacterized protein.
  
     0.501
pdam_00003794
F5/8 type C domain-containing protein.
  
     0.495
pdam_00001297
Uncharacterized protein.
  
     0.491
pdam_00010604
F5/8 type C domain-containing protein.
  
     0.491
pdam_00012126
F5/8 type C domain-containing protein.
  
     0.486
pdam_00001294
F5/8 type C domain-containing protein.
  
     0.483
pdam_00010509
Uncharacterized protein.
  
     0.473
pdam_00007287
F5/8 type C domain-containing protein.
  
     0.465
pdam_00019767
F5/8 type C domain-containing protein.
  
     0.463
pdam_00010334
Uncharacterized protein.
  
     0.459
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.