STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00020723Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (326 aa)    
Predicted Functional Partners:
pdam_00000697
Uncharacterized protein.
  
 
 0.955
pdam_00021047
Uncharacterized protein.
    
 
 0.953
pdam_00017008
Uncharacterized protein.
   
 
 0.918
pdam_00001750
EngB-type G domain-containing protein.
  
 
 0.917
pdam_00019724
Ribosomal_L11_N domain-containing protein.
   
 
 0.913
pdam_00013372
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
    
 
 0.903
pdam_00014612
Uncharacterized protein.
    
 
 0.902
pdam_00007404
Uncharacterized protein.
   
 
 0.902
pdam_00008150
L51_S25_CI-B8 domain-containing protein.
    
   0.901
pdam_00022099
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.873
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.