STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00009750Uncharacterized protein. (491 aa)    
Predicted Functional Partners:
pdam_00008890
Uncharacterized protein.
 
 
 
 0.913
pdam_00022586
Uncharacterized protein.
 
 
 
 0.912
pdam_00005771
Citrate synthase; Belongs to the citrate synthase family.
   
 0.823
pdam_00021399
FBPase domain-containing protein; Belongs to the FBPase class 1 family.
   
  
 0.689
pdam_00011310
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.675
pdam_00012716
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
   
 0.671
pdam_00007308
Malic enzyme.
    
 0.658
pdam_00005222
4Fe-4S ferredoxin-type domain-containing protein.
  
 
 0.638
pdam_00021025
Acetyl-coenzyme A synthetase.
   
 0.620
pdam_00019546
Uncharacterized protein.
   
 0.620
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.