STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00025586OTU domain-containing protein. (386 aa)    
Predicted Functional Partners:
pdam_00016559
WD_REPEATS_REGION domain-containing protein.
    
 0.895
pdam_00012042
WD_REPEATS_REGION domain-containing protein.
    
 0.880
pdam_00015396
Ubiquitin-like domain-containing protein.
    
 0.719
pdam_00015249
Uncharacterized protein.
    
 0.654
pdam_00005081
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.645
pdam_00007480
Uncharacterized protein.
    
 0.615
pdam_00007483
Ubiquitin-like domain-containing protein.
    
 0.615
pdam_00015042
Uncharacterized protein.
    
 0.612
pdam_00013818
Uncharacterized protein.
     
 0.571
pdam_00008514
Uncharacterized protein.
    
 
 0.540
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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