STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdam_00018877Uncharacterized protein. (289 aa)    
Predicted Functional Partners:
pdam_00020580
Uncharacterized protein.
    
 0.636
pdam_00009012
Uncharacterized protein.
    
 
 0.563
pdam_00001250
Uncharacterized protein.
    
 0.485
pdam_00001251
Uncharacterized protein.
    
 0.485
pdam_00001247
Uncharacterized protein.
    
 0.485
pdam_00006618
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.450
pdam_00022860
Uncharacterized protein.
    
 0.450
pdam_00001922
G_PROTEIN_RECEP_F2_4 domain-containing protein.
    
 0.450
pdam_00018198
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.450
pdam_00011316
Uncharacterized protein.
    
 0.450
Your Current Organism:
Pocillopora damicornis
NCBI taxonomy Id: 46731
Other names: P. damicornis, Pocillopora caespitosa laysanensis, Pocillopora damicornis laysanensis, cauliflower coral, lace coral
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